Pairwise fitting emdb-1183 on pdb-5kip by gmfit



Pairwise fitting of target emdb-1183 on reference pdb-5kip by gmfit(PID:4147470).

RANK[1] Corr.Coeff:0.011 [JSmol] [Molmil]
TARGET(emdb-1183)
display:
color:
Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(pdb-5kip)
display:
color:
b'ASYMMETRIC UNIT FOR THE COAT PROTEINS OF PHAGE QBETA ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.011 0.011 0.011 0.011 0.011 0.011 0.011 0.011 0.011 0.011

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "5kip"(PDB-format) or "5kip"(mmCIF-format), and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.234416,-0.232099,0.944023 61.037603 center 0,0,0 model #1
    move 190.468490,218.653708,311.733189 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 5kip)] [Download the target GMM(emdb 1183)] [Download gmfit result file(4147470)]