Pairwise fitting emdb-1183 on emdb-1882 by gmfit



Pairwise fitting of target emdb-1183 on reference emdb-1882 by gmfit(PID:4124944).

RANK[1] Corr.Coeff:0.730 [JSmol] [Molmil]
TARGET(emdb-1183)
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Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(emdb-1882)
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Mutually-induced conformational switching of RNA and coat protein underpins efficient assembly of a viral capsid. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.730 0.723 0.720 0.718 0.711 0.710 0.706 0.705 0.702 0.702

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1882.map.gz", and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.336365,-0.925946,0.171706 121.700259 center 0,0,0 model #1
    move 187.223365,187.612368,188.202976 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1882)] [Download the target GMM(emdb 1183)] [Download gmfit result file(4124944)]