Pairwise fitting emdb-1183 on emdb-1880 by gmfit










Pairwise fitting of target emdb-1183 on reference emdb-1880 by gmfit(PID:4162669).





RANK[1] Corr.Coeff:0.719

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1183)

display:



color:



Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1183)]







REFERENCE(emdb-1880)

display:



color:


Mutually-induced conformational switching of RNA and coat protein underpins efficient assembly of a viral capsid. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.719
0.708
0.706
0.705
0.702
0.700
0.700
0.694
0.693
0.693







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1880.map.gz", and read it.

  2.  Download the Target map "emd_1183.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.103809,-0.723579,-0.682390 57.375804 center 0,0,0 model #1
move 186.303041,185.833816,186.465011 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1880)]

[Download the target GMM(emdb 1183)]

[Download gmfit result file(4162669)]