Pairwise fitting emdb-1183 on emdb-1838 by gmfit



Pairwise fitting of target emdb-1183 on reference emdb-1838 by gmfit(PID:4060357).

RANK[1] Corr.Coeff:0.644 [JSmol] [Molmil]
TARGET(emdb-1183)
display:
color:
Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1183)]
REFERENCE(emdb-1838)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.644 0.640 0.639 0.638 0.638 0.637 0.637 0.636 0.635 0.633

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1838.map.gz", and read it.
  2. Download the Target map "emd_1183.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.010785,-0.998389,0.055708 77.379788 center 0,0,0 model #1
    move 169.472931,172.518654,169.810967 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1838)] [Download the target GMM(emdb 1183)] [Download gmfit result file(4060357)]