Pairwise fitting emdb-1183 on emdb-1838 by gmfit










Pairwise fitting of target emdb-1183 on reference emdb-1838 by gmfit(PID:4158162).





RANK[1] Corr.Coeff:0.644

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1183)

display:



color:



Structural and functional insights into the interaction of echoviruses and decay-accelerating factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1183)]







REFERENCE(emdb-1838)

display:



color:


Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.644
0.640
0.639
0.638
0.638
0.637
0.637
0.636
0.635
0.633







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1838.map.gz", and read it.

  2.  Download the Target map "emd_1183.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.010785,-0.998389,0.055708 77.379788 center 0,0,0 model #1
move 169.472931,172.518654,169.810967 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1838)]

[Download the target GMM(emdb 1183)]

[Download gmfit result file(4158162)]