Pairwise fitting emdb-1157 on pdb-4udv by gmfit










Pairwise fitting of target emdb-1157 on reference pdb-4udv by gmfit(PID:619680).





RANK[1] Corr.Coeff:0.276

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1157)

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ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1157)]







REFERENCE(pdb-4udv)

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b'CRYO-EM STRUCTURE OF TMV AT 3.35 A RESOLUTION                         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.276
0.198
0.146
0.144
0.140
0.130
0.128
0.124
0.124
0.108







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4udv"(PDB-format) or 
 "4udv"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1157.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.343525,0.633600,0.693211 155.270170 center 0,0,0 model #1
move 11.427943,-162.947122,-112.771783 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!