Pairwise fitting emdb-1157 on pdb-4ckd by gmfit



Pairwise fitting of target emdb-1157 on reference pdb-4ckd by gmfit(PID:4109547).

RANK[1] Corr.Coeff:0.640 [JSmol] [Molmil]
TARGET(emdb-1157)
display:
color:
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1157)]
REFERENCE(pdb-4ckd)
display:
color:
b'MODEL OF COMPLEX BETWEEN THE E.COLI ENZYME BETA-GALACTOSIDASE AND FOUR' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.640 0.599 0.593 0.590 0.578 0.561 0.554 0.553 0.496 0.455

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4ckd"(PDB-format) or "4ckd"(mmCIF-format), and read it.
  2. Download the Target map "emd_1157.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.707821,0.198940,-0.677800 32.926874 center 0,0,0 model #1
    move -25.944741,57.489881,96.822991 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4ckd)] [Download the target GMM(emdb 1157)] [Download gmfit result file(4109547)]