Pairwise fitting emdb-1157 on pdb-3j4b by gmfit



Pairwise fitting of target emdb-1157 on reference pdb-3j4b by gmfit(PID:4149062).

RANK[1] Corr.Coeff:0.579 [JSmol] [Molmil]
TARGET(emdb-1157)
display:
color:
ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1157)]
REFERENCE(pdb-3j4b)
display:
color:
b'STRUCTURE OF T7 GATEKEEPER PROTEIN (GP11) ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.579 0.526 0.524 0.524 0.464 0.462 0.446 0.445 0.353 0.352

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j4b"(PDB-format) or "3j4b"(mmCIF-format), and read it.
  2. Download the Target map "emd_1157.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.469012,0.838783,0.276534 163.746959 center 0,0,0 model #1
    move 150.706544,33.674619,244.250173 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 3j4b)] [Download the target GMM(emdb 1157)] [Download gmfit result file(4149062)]