Pairwise fitting emdb-1157 on emdb-5504 by gmfit










Pairwise fitting of target emdb-1157 on reference emdb-5504 by gmfit(PID:4057983).





RANK[1] Corr.Coeff:0.341

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1157)

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color:



ATPase-dependent cooperative binding of ORC and Cdc6 to origin DNA. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1157)]







REFERENCE(emdb-5504)

display:



color:


Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.341
0.324
0.305
0.284
0.281
0.277
0.275
0.273
0.235
0.207







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5504.map.gz", and read it.

  2.  Download the Target map "emd_1157.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.883476,0.171957,0.435775 79.227665 center 0,0,0 model #1
move -151.954195,-40.167041,-176.562303 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5504)]

[Download the target GMM(emdb 1157)]

[Download gmfit result file(4057983)]