Pairwise fitting emdb-1090 on emdb-6128 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-6128 by gmfit(PID:1876963).





RANK[1] Corr.Coeff:0.653

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

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Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-6128)

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color:


Negative stain random conical tilt reconstructions of E. coli ribosomal 30S subunit assembly intermediates [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.653
0.652
0.619
0.614
0.613
0.611
0.606
0.596
0.594
0.593







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6128.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.524649,-0.195619,0.828539 178.975048 center 0,0,0 model #1
move 213.890112,290.668756,222.467936 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6128)]

[Download the target GMM(emdb 1090)]

[Download gmfit result file(1876963)]