Pairwise fitting emdb-1090 on emdb-5930 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-5930 by gmfit(PID:4118531).

RANK[1] Corr.Coeff:0.530 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-5930)
display:
color:
CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.530 0.506 0.484 0.473 0.469 0.449 0.440 0.408 0.345 0.313

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5930.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.450282,0.881857,0.139910 52.744061 center 0,0,0 model #1
    move 20.295203,-41.189290,-36.897646 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5930)] [Download the target GMM(emdb 1090)] [Download gmfit result file(4118531)]