Pairwise fitting emdb-1090 on emdb-5930 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-5930 by gmfit(PID:856739).





RANK[1] Corr.Coeff:0.530

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

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Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-5930)

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CasA mediates Cas3-catalyzed target degradation during CRISPR RNA-guided interference [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.530
0.506
0.484
0.473
0.469
0.449
0.440
0.408
0.345
0.313







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5930.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.450282,0.881857,0.139910 52.744061 center 0,0,0 model #1
move 20.295203,-41.189290,-36.897646 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5930)]

[Download the target GMM(emdb 1090)]

[Download gmfit result file(856739)]