Pairwise fitting emdb-1090 on emdb-5909 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-5909 by gmfit(PID:4128829).

RANK[1] Corr.Coeff:0.679 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-5909)
display:
color:
Cryo-EM structure of high salt treated immature 30S ribosomal subunit from rsga and rbfa deleted E.coli strain [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.679 0.638 0.562 0.542 0.519 0.485 0.470 0.433 0.389 0.298

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5909.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.411737,0.173076,-0.894716 177.096766 center 0,0,0 model #1
    move -43.594178,28.548646,32.104996 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5909)] [Download the target GMM(emdb 1090)] [Download gmfit result file(4128829)]