Pairwise fitting emdb-1090 on emdb-5824 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-5824 by gmfit(PID:1252947).





RANK[1] Corr.Coeff:0.482

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

display:



color:



Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-5824)

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color:


Negative-stain electron microscopy reconstruction of Tetrahymena telomerase (f-p50, affinity labeled by one copy of anti-FLAG Fab) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.482
0.463
0.454
0.413
0.401
0.387
0.382
0.361
0.319
0.317







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5824.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.407045,-0.755498,0.513358 161.014423 center 0,0,0 model #1
move -1.525369,-2.337159,65.701749 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!