Pairwise fitting emdb-1090 on emdb-5314 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-5314 by gmfit(PID:4087359).

RANK[1] Corr.Coeff:0.499 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-5314)
display:
color:
Structures of the RNA-guided surveillance complex from a bacterial immune system [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.499 0.466 0.464 0.458 0.439 0.385 0.380 0.354 0.257 0.251

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5314.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.108349,0.985623,-0.129646 68.040476 center 0,0,0 model #1
    move -9.560205,-40.456544,-45.142185 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5314)] [Download the target GMM(emdb 1090)] [Download gmfit result file(4087359)]