Pairwise fitting emdb-1090 on emdb-2982 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-2982 by gmfit(PID:4093272).

RANK[1] Corr.Coeff:0.488 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-2982)
display:
color:
Sub-tomogram average of a mammalian F-type ATP synthase monomer [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.488 0.451 0.449 0.432 0.427 0.423 0.404 0.392 0.318 0.315

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2982.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.349851,0.676917,-0.647601 95.110539 center 0,0,0 model #1
    move 31.238833,12.199548,127.553523 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2982)] [Download the target GMM(emdb 1090)] [Download gmfit result file(4093272)]