Pairwise fitting emdb-1090 on emdb-2764 by gmfit



Pairwise fitting of target emdb-1090 on reference emdb-2764 by gmfit(PID:4126590).

RANK[1] Corr.Coeff:0.700 [JSmol] [Molmil]
TARGET(emdb-1090)
display:
color:
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1090)]
REFERENCE(emdb-2764)
display:
color:
CryoEM structure of the 40S-eIF1-eIF1A preinitiation complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.700 0.579 0.551 0.537 0.535 0.534 0.520 0.499 0.407 0.401

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2764.map.gz", and read it.
  2. Download the Target map "emd_1090.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.190380,-0.709333,0.678677 28.410367 center 0,0,0 model #1
    move 256.915719,187.530799,190.420386 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2764)] [Download the target GMM(emdb 1090)] [Download gmfit result file(4126590)]