Pairwise fitting emdb-1090 on emdb-2764 by gmfit










Pairwise fitting of target emdb-1090 on reference emdb-2764 by gmfit(PID:4126590).





RANK[1] Corr.Coeff:0.700

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1090)

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Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: the IRES functions as an RNA-based translation factor. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1090)]







REFERENCE(emdb-2764)

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color:


CryoEM structure of the 40S-eIF1-eIF1A preinitiation complex [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.700
0.579
0.551
0.537
0.535
0.534
0.520
0.499
0.407
0.401







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2764.map.gz", and read it.

  2.  Download the Target map "emd_1090.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.190380,-0.709333,0.678677 28.410367 center 0,0,0 model #1
move 256.915719,187.530799,190.420386 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2764)]

[Download the target GMM(emdb 1090)]

[Download gmfit result file(4126590)]