Pairwise fitting emdb-1022 on pdb-4bt1 by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-4bt1 by gmfit(PID:4073807).





RANK[1] Corr.Coeff:0.368

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-4bt1)

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b'MUB IS AN AAAPLUS ATPASE THAT FORMS HELICAL FILAMENTS TO CONTROL      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.368
0.360
0.331
0.285
0.228
0.162
0.157
0.154
0.131
0.127







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4bt1"(PDB-format) or 
 "4bt1"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.791506,0.611160,0.001222 167.617014 center 0,0,0 model #1
move 80.061513,93.111606,155.396706 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4bt1)]

[Download the target GMM(emdb 1022)]

[Download gmfit result file(4073807)]