Pairwise fitting emdb-1022 on pdb-4au6 by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-4au6 by gmfit(PID:4124805).





RANK[1] Corr.Coeff:0.659

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-4au6)

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b'LOCATION OF THE DSRNA-DEPENDENT POLYMERASE, VP1, IN ROTAVIRUS         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.659
0.650
0.650
0.649
0.648
0.648
0.647
0.642
0.596
0.590







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4au6"(PDB-format) or 
 "4au6"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.237777,-0.354121,-0.904467 76.063818 center 0,0,0 model #1
move 43.912489,56.338619,-292.847961 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4au6)]

[Download the target GMM(emdb 1022)]

[Download gmfit result file(4124805)]