Pairwise fitting emdb-1022 on pdb-4au6 by gmfit



Pairwise fitting of target emdb-1022 on reference pdb-4au6 by gmfit(PID:4107234).

RANK[1] Corr.Coeff:0.659 [JSmol] [Molmil]
TARGET(emdb-1022)
display:
color:
Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1022)]
REFERENCE(pdb-4au6)
display:
color:
b'LOCATION OF THE DSRNA-DEPENDENT POLYMERASE, VP1, IN ROTAVIRUS ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.659 0.650 0.650 0.649 0.648 0.648 0.647 0.642 0.596 0.590

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4au6"(PDB-format) or "4au6"(mmCIF-format), and read it.
  2. Download the Target map "emd_1022.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.237777,-0.354121,-0.904467 76.063818 center 0,0,0 model #1
    move 43.912489,56.338619,-292.847961 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4au6)] [Download the target GMM(emdb 1022)] [Download gmfit result file(4107234)]