Pairwise fitting emdb-1022 on pdb-3j67 by gmfit



Pairwise fitting of target emdb-1022 on reference pdb-3j67 by gmfit(PID:4098418).

RANK[1] Corr.Coeff:0.742 [JSmol] [Molmil]
TARGET(emdb-1022)
display:
color:
Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1022)]
REFERENCE(pdb-3j67)
display:
color:
b'STRUCTURAL MECHANISM OF THE DYNEIN POWERSTROKE (POST-POWERSTROKE ' [Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.742 0.719 0.719 0.716 0.711 0.699 0.695 0.680 0.408 0.384

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "3j67"(PDB-format) or "3j67"(mmCIF-format), and read it.
  2. Download the Target map "emd_1022.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.877495,0.475835,-0.059862 151.102309 center 0,0,0 model #1
    move -204.327551,-447.742032,-461.952176 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 3j67)] [Download the target GMM(emdb 1022)] [Download gmfit result file(4098418)]