Pairwise fitting emdb-1022 on pdb-2y7c by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-2y7c by gmfit(PID:295596).





RANK[1] Corr.Coeff:0.623

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-2y7c)

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b'ATOMIC MODEL OF THE OCR-BOUND METHYLASE COMPLEX FROM THE TYPE I       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.623
0.615
0.610
0.606
0.604
0.596
0.591
0.587
0.460
0.444







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2y7c"(PDB-format) or 
 "2y7c"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.338415,0.669328,0.661420 136.768486 center 0,0,0 model #1
move 121.982671,-88.278373,30.437434 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!