Pairwise fitting emdb-1022 on pdb-1mhs by gmfit










Pairwise fitting of target emdb-1022 on reference pdb-1mhs by gmfit(PID:4164529).





RANK[1] Corr.Coeff:0.684

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

display:



color:



Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(pdb-1mhs)

display:



color:


b'MODEL OF NEUROSPORA CRASSA PROTON ATPASE                              ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.684
0.649
0.642
0.633
0.631
0.627
0.617
0.595
0.460
0.404







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1mhs"(PDB-format) or 
 "1mhs"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.749503,-0.149657,-0.644863 141.428205 center 0,0,0 model #1
move -100.815178,156.604804,-3.431637 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 1mhs)]

[Download the target GMM(emdb 1022)]

[Download gmfit result file(4164529)]