Pairwise fitting emdb-1022 on emdb-2110 by gmfit










Pairwise fitting of target emdb-1022 on reference emdb-2110 by gmfit(PID:4130840).





RANK[1] Corr.Coeff:0.447

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1022)

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color:



Three-dimensional reconstructions from cryoelectron microscopy images reveal an intimate complex between helicase DnaB and its loading partner DnaC. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1022)]







REFERENCE(emdb-2110)

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color:


Negative structure of open and closed conformation of crm1 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.447
0.440
0.415
0.411
0.405
0.401
0.378
0.377
0.324
0.289







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2110.map.gz", and read it.

  2.  Download the Target map "emd_1022.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.999649,0.024373,0.010367 97.062790 center 0,0,0 model #1
move 7.195239,32.846140,201.783883 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2110)]

[Download the target GMM(emdb 1022)]

[Download gmfit result file(4130840)]