Pairwise fitting emdb-1774 on emdb-3019 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-3019 by gmfit(PID:3139075).





RANK[1] Corr.Coeff:0.710

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

display:



color:



Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-3019)

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color:


Structure of HCV IRES bound to the human ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.710
0.709
0.607
0.605
0.541
0.529
0.525
0.510
0.482
0.440







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3019.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.672546,-0.445914,-0.590628 168.483859 center 0,0,0 model #1
move 378.895406,289.199808,205.710732 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3019)]

[Download the target GMM(emdb 1774)]

[Download gmfit result file(3139075)]