Pairwise fitting emdb-1774 on emdb-1348 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-1348 by gmfit(PID:3723764).





RANK[1] Corr.Coeff:0.707

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

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Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-1348)

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The eukaryotic translation initiation factors eIF1 and eIF1A induce an open conformation of the 40S ribosome. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.707
0.700
0.567
0.566
0.564
0.551
0.546
0.541
0.526
0.466







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1348.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.113009,-0.826256,0.551842 105.372271 center 0,0,0 model #1
move 248.462151,-125.113101,-24.580117 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1348)]

[Download the target GMM(emdb 1774)]

[Download gmfit result file(3723764)]