Pairwise fitting emdb-5168 on emdb-5955 by gmfit










Pairwise fitting of target emdb-5168 on reference emdb-5955 by gmfit(PID:679724).





RANK[2] Corr.Coeff:0.497

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5168)

display:



color:



Direct visualization of secondary structures of F-actin by electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5168)]







REFERENCE(emdb-5955)

display:



color:


Single particle EM reveals plasticity of interactions between the adenovirus penton base and integrin alphaV-beta3 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.520
0.497
0.493
0.483
0.472
0.471
0.464
0.461
0.451
0.428







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5955.map.gz", and read it.

  2.  Download the Target map "emd_5168.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.278219,0.663919,-0.694122 154.793804 center 0,0,0 model #1
move -4.612172,5.076552,7.420584 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!