Pairwise fitting emdb-5034 on emdb-2706 by gmfit










Pairwise fitting of target emdb-5034 on reference emdb-2706 by gmfit(PID:3165284).





RANK[7] Corr.Coeff:0.362

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-5034)

display:



color:



Structure of a type IV secretion system core complex [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-5034)]







REFERENCE(emdb-2706)

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color:


The structure of the immature HIV-1 capsid in intact virus particles at sub-nm resolution [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.583
0.573
0.564
0.525
0.390
0.380
0.362
0.288
0.251
0.251







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2706.map.gz", and read it.

  2.  Download the Target map "emd_5034.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.000162,-0.000336,1.000000 148.382516 center 0,0,0 model #1
move 387.258642,193.728095,-26.364150 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!