Pairwise fitting emdb-1446 on emdb-2160 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-2160 by gmfit(PID:2953772).





RANK[7] Corr.Coeff:0.360

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-2160)

display:



color:


Electron cryo-microscopy of the empty (DNA-lacking) head of the yersiniophage phiR1-37 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.380
0.365
0.364
0.364
0.363
0.362
0.360
0.357
0.351
0.349







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2160.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.604493,-0.673186,-0.425921 150.770116 center 0,0,0 model #1
move 895.965600,909.979716,894.175480 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!