Pairwise fitting emdb-1252 on emdb-8090 by gmfit










Pairwise fitting of target emdb-1252 on reference emdb-8090 by gmfit(PID:2811789).





RANK[4] Corr.Coeff:0.541

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1252)

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Nucleotide-dependent conformational changes in the DnaA-like core of the origin recognition complex. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1252)]







REFERENCE(emdb-8090)

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Cryo-EM structure of GluA2/3 AMPA receptor heterotetramer (model I) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.635
0.604
0.548
0.541
0.535
0.522
0.518
0.513
0.455
0.445







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8090.map.gz", and read it.

  2.  Download the Target map "emd_1252.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.669628,-0.617444,-0.412749 106.346705 center 0,0,0 model #1
move -44.768503,-82.892339,47.735074 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!