Pairwise fitting pdb-4v4v on pdb-4v6o by gmfit










Pairwise fitting of target pdb-4v4v on reference pdb-4v6o by gmfit(PID:1516756).





RANK[6] Corr.Coeff:0.731

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-4v4v)

display:



color:



 [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-4v4v)]







REFERENCE(pdb-4v6o)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.923
0.896
0.759
0.741
0.736
0.731
0.725
0.716
0.713
0.711







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v6o"(PDB-format) or 
 "4v6o"(mmCIF-format), and read it.

  2.  Download the Target molecule "4v4v"(PDB-format) or
  "4v4v"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.886343,0.451637,0.102082 99.893189 center 0,0,0 model #1
move 8.283019,-1.962929,-8.358174 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!