Pairwise fitting emdb-1559 on pdb-4uxy by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-4uxy by gmfit(PID:1474799).





RANK[9] Corr.Coeff:0.555

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

display:



color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-4uxy)

display:



color:


b'CONSERVED MECHANISMS OF MICROTUBULE-STIMULATED ADP RELEASE, ATP       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.625
0.618
0.603
0.602
0.575
0.572
0.569
0.567
0.555
0.554







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4uxy"(PDB-format) or 
 "4uxy"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.857188,-0.507137,-0.089672 85.423131 center 0,0,0 model #1
move 248.036003,833.670526,-487.627755 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!