Pairwise fitting pdb-1x18 on pdb-1d3i by gmfit










Pairwise fitting of target pdb-1x18 on reference pdb-1d3i by gmfit(PID:1412791).





RANK[10] Corr.Coeff:0.449

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

display:



color:



b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(pdb-1d3i)

display:



color:


b'CRYO-EM STRUCTURE OF HUMAN RHINOVIRUS 14 (HRV14) COMPLEXED WITH A TWO-' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.600
0.529
0.512
0.505
0.501
0.487
0.480
0.473
0.466
0.449







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "1d3i"(PDB-format) or 
 "1d3i"(mmCIF-format), and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.146437,0.540861,0.828267 175.485539 center 0,0,0 model #1
move -53.406647,-7.619675,104.425774 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!