Pairwise fitting pdb-3izd on pdb-2w4v by gmfit










Pairwise fitting of target pdb-3izd on reference pdb-2w4v by gmfit(PID:1389821).





RANK[10] Corr.Coeff:0.083

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-3izd)

display:



color:



b'MODEL OF THE LARGE SUBUNIT RNA EXPANSION SEGMENT ES27L-OUT BASED ON A ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-3izd)]







REFERENCE(pdb-2w4v)

display:



color:


b'ISOMETRICALLY CONTRACTING INSECT ASYNCHRONOUS FLIGHT MUSCLE QUICK     ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.412
0.341
0.316
0.292
0.290
0.131
0.124
0.109
0.102
0.083







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "2w4v"(PDB-format) or 
 "2w4v"(mmCIF-format), and read it.

  2.  Download the Target molecule "3izd"(PDB-format) or
  "3izd"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.140269,0.690289,0.709807 165.623251 center 0,0,0 model #1
move -2.248004,-57.539376,-87.709889 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!