Pairwise fitting pdb-1x18 on emdb-1788 by gmfit










Pairwise fitting of target pdb-1x18 on reference emdb-1788 by gmfit(PID:1107256).





RANK[10] Corr.Coeff:0.403

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(pdb-1x18)

display:



color:



b'CONTACT SITES OF ERA GTPASE ON THE THERMUS THERMOPHILUS 30S SUBUNIT   ' [Ngauss:20]

[Download superimposed target atoms (PDB)(pdb-1x18)]







REFERENCE(emdb-1788)

display:



color:


Doublecortin-stabilised microtubules at secondary structure resolution [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.616
0.553
0.527
0.521
0.512
0.484
0.448
0.432
0.419
0.403







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1788.map.gz", and read it.

  2.  Download the Target molecule "1x18"(PDB-format) or
  "1x18"(mmCIF-format), and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.921039,-0.345354,-0.180049 63.445652 center 0,0,0 model #1
move 173.950706,80.002465,36.758009 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!