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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDCM5 |
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![]() | Vaccinia virus binary E9 polymerase / DNA complex
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Function / homology | ![]() viral DNA genome replication / ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function |
Biological species | ![]() ![]() synthetic construct (others) |
![]() | ![]() Title: The vaccinia virus DNA polymerase structure provides insights into the mode of processivity factor binding Authors: Tarbouriech N / Ducournau C / Hutin S / Mas P / Man P / Forest E / Hart D / Peyrefitte C / Burmeister W |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Data source
SASBDB page | ![]() |
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-Related structure data
Related structure data | C: citing same article ( |
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Similar structure data |
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External links
Related items in Molecule of the Month |
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-Models
Model #1359 | ![]() Type: atomic / Radius of dummy atoms: 1.90 A / Symmetry ![]() Comment: DNA and conformation from entry 3iay, domainwise alignment of E9 structure Chi-square value: 1.083 / P-value: 0.000120 ![]() |
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Sample
![]() | Name: Vaccinia virus binary E9 polymerase / DNA complex / Entity id: 726 / 727 |
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Buffer | Name: 20 mM Tris HCl, 100 mM NaCl, 4 mM DTT / pH: 7 |
Entity #726 | Name: E9 exo- / Type: protein / Description: DNA polymerase E9 exo- mutant / Formula weight: 117.14 / Num. of mol.: 1 / Source: Vaccinia virus (strain Copenhagen) / References: UniProt: P20509 Sequence: GAMDPDVRCI NWFESHGENR FLYLKSRCRN GETVFIRFPH YFYYVVTDEI YQSLSPPPFN ARPLGKMRTI DIDETISYNL DIKDRKCSVA DMWLIEEPKK RSIQNATMDE FLNISWFYIS NGISPDGCYS LDEQYLTKIN NGCYHCDDPR NCFAKKIPRF DIPRSYLFLA ...Sequence: GAMDPDVRCI NWFESHGENR FLYLKSRCRN GETVFIRFPH YFYYVVTDEI YQSLSPPPFN ARPLGKMRTI DIDETISYNL DIKDRKCSVA DMWLIEEPKK RSIQNATMDE FLNISWFYIS NGISPDGCYS LDEQYLTKIN NGCYHCDDPR NCFAKKIPRF DIPRSYLFLA IACHFDKKFP SVFINPISHT SYCYIDLSGK RLLFTLINEE MLTEQEIQEA VDRGCLRIQS LMEMDYEREL VLCSEIVLLR IAKQLLELTF DYVVTFNGHN FDLRYITNRL ELLTGEKIIF RSPDKKEAVH LCIYERNQSS HKGVGGMANT TFHVNNNNGT IFFDLYSFIQ KSEKLDSYKL DSISKNAFSC MGKVLNRGVR EMTFIGDDTT DAKGKAAAFA KVLTTGNYVT VDEDIICKVI RKDIWENGFK VVLLCPTLPN DTYKLSFGKD DVDLAQMYKD YNLNIALDMA RYCIHDACLC QYLWEYYGVE TKTDAGASTY VLPQSMVFEY RASTVIKGPL LKLLLETKTI LVRSETKQKF PYEGGKVFAP KQKMFSNNVL IFDYNSLYPN VCIFGNLSPE TLVGVVVSTN RLEEEINNQL LLQKYPPPRY ITVHCEPRLP NLISEIAIFD RSIEGTIPRL LRTFLAERAR YKKMLKQATS STEKAIYDSM QYTYKIVANS VYGLMGFRNS ALYSYASAKS CTSIGRRMIL YLESVLNGAE LSNGMLRFAN PLSNPFYMDD RDINPIVKTS LPIDYRFRFR SVYGDTDSVF TEIDSQDVDK SIEIAKELER LINNRVLFNN FKIEFEAVYK NLIMQSKKKY TTMKYSASSN SKSVPERINK GTSETRRDVS KFHKNMIKTY KTRLSEMLSE GRMNSNQVCI DILRSLETDL RSEFDSRSSP LELFMLSRMH HSNYKSADNP NMYLVTEYNK NNPETIELGE RYYFAYICPA NVPWTKKLVN IKTYETIIDR SFKLGSDQRI FYEVYFKRLT SEIVNLLDNK VLCISFFERM FGSKPTFYEA |
Entity #727 | Name: DNA hairpin![]() Sequence: AAAGGCGCTG CTGAGTTTTC TCAGCAGCG |
-Experimental information
Beam | Instrument name: ESRF BM29 / City: Grenoble / 国: France ![]() ![]() | ||||||||||||||||||||||||||||||
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Detector | Name: Pilatus 1M | ||||||||||||||||||||||||||||||
Scan |
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Distance distribution function P(R) |
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Result |
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