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Yorodumi- PDB-7sol: Crystal Structures of the bispecific ubiquitin/FAT10 activating e... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7sol | ||||||||||||
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Title | Crystal Structures of the bispecific ubiquitin/FAT10 activating enzyme, Uba6 | ||||||||||||
Components |
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Keywords | SIGNALING PROTEIN/Ligase / UBIQUITIN / E1 / ADENYLATION / THIOESTER BOND / E2 / FAT10 / IP6 / LIGASE / ATP-binding / nucleotide binding / conformational change / SIGNALING PROTEIN / SIGNALING PROTEIN-Ligase complex | ||||||||||||
Function / homology | Function and homology information FAT10 activating enzyme activity / protein modification by small protein conjugation / amygdala development / E1 ubiquitin-activating enzyme / ubiquitin activating enzyme activity / thiosulfate sulfurtransferase activity / dendritic spine development / nucleotidyltransferase activity / Synthesis of active ubiquitin: roles of E1 and E2 enzymes / locomotory behavior ...FAT10 activating enzyme activity / protein modification by small protein conjugation / amygdala development / E1 ubiquitin-activating enzyme / ubiquitin activating enzyme activity / thiosulfate sulfurtransferase activity / dendritic spine development / nucleotidyltransferase activity / Synthesis of active ubiquitin: roles of E1 and E2 enzymes / locomotory behavior / learning / hippocampus development / modification-dependent protein catabolic process / protein tag activity / Antigen processing: Ubiquitination & Proteasome degradation / ubiquitin-dependent protein catabolic process / protein ubiquitination / mRNA binding / ubiquitin protein ligase binding / ATP binding / nucleus / cytosol / cytoplasm Similarity search - Function | ||||||||||||
Biological species | Homo sapiens (human) Triticum aestivum (bread wheat) | ||||||||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 2.25000635563 Å | ||||||||||||
Authors | Olsen, S.K. / Gao, F. / Lv, Z. | ||||||||||||
Funding support | United States, 3items
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Citation | Journal: Nat Commun / Year: 2022 Title: Crystal structures reveal catalytic and regulatory mechanisms of the dual-specificity ubiquitin/FAT10 E1 enzyme Uba6. Authors: Yuan, L. / Gao, F. / Lv, Z. / Nayak, D. / Nayak, A. / Santos Bury, P.D. / Cano, K.E. / Jia, L. / Oleinik, N. / Atilgan, F.C. / Ogretmen, B. / Williams, K.M. / Davies, C. / El Oualid, F. / ...Authors: Yuan, L. / Gao, F. / Lv, Z. / Nayak, D. / Nayak, A. / Santos Bury, P.D. / Cano, K.E. / Jia, L. / Oleinik, N. / Atilgan, F.C. / Ogretmen, B. / Williams, K.M. / Davies, C. / El Oualid, F. / Wasmuth, E.V. / Olsen, S.K. | ||||||||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7sol.cif.gz | 1 MB | Display | PDBx/mmCIF format |
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PDB format | pdb7sol.ent.gz | 726.8 KB | Display | PDB format |
PDBx/mmJSON format | 7sol.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/so/7sol ftp://data.pdbj.org/pub/pdb/validation_reports/so/7sol | HTTPS FTP |
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-Related structure data
Related structure data | 6dc6S S: Starting model for refinement |
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Similar structure data | Similarity search - Function & homologyF&H Search |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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