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Yorodumi- PDB-7kgv: Crystal structure of sodium-coupled neutral amino acid transporte... -
+Open data
-Basic information
Entry | Database: PDB / ID: 7kgv | ||||||
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Title | Crystal structure of sodium-coupled neutral amino acid transporter SLC38A9 in the N-terminal plugged form | ||||||
Components |
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Keywords | TRANSPORT PROTEIN / SLC38A9 / MEMBRANE PROTEIN | ||||||
Function / homology | Function and homology information Macroautophagy / MTOR signalling / Energy dependent regulation of mTOR by LKB1-AMPK / TP53 Regulates Metabolic Genes / Regulation of PTEN gene transcription / Amino acids regulate mTORC1 / mTORC1-mediated signalling / asparagine transport / L-asparagine transmembrane transporter activity / sterol sensor activity ...Macroautophagy / MTOR signalling / Energy dependent regulation of mTOR by LKB1-AMPK / TP53 Regulates Metabolic Genes / Regulation of PTEN gene transcription / Amino acids regulate mTORC1 / mTORC1-mediated signalling / asparagine transport / L-asparagine transmembrane transporter activity / sterol sensor activity / amino acid sensor activity / L-arginine transmembrane transport / L-arginine transmembrane transporter activity / glutamine transport / L-glutamine transmembrane transporter activity / L-amino acid transmembrane transporter activity / L-leucine transmembrane transporter activity / amino acid transmembrane transport / L-leucine transport / amino acid transmembrane transporter activity / arginine binding / cholesterol binding / positive regulation of TOR signaling / positive regulation of TORC1 signaling / guanyl-nucleotide exchange factor activity / cellular response to amino acid stimulus / late endosome / late endosome membrane / lysosome / lysosomal membrane / metal ion binding Similarity search - Function | ||||||
Biological species | Danio rerio (zebrafish) Mus musculus (house mouse) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / MOLECULAR REPLACEMENT / Resolution: 3.4 Å | ||||||
Authors | Lei, H. / Mu, X. / Hattne, J. / Gonen, T. | ||||||
Citation | Journal: Structure / Year: 2021 Title: A conformational change in the N terminus of SLC38A9 signals mTORC1 activation. Authors: Lei, H.T. / Mu, X. / Hattne, J. / Gonen, T. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 7kgv.cif.gz | 758.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb7kgv.ent.gz | 531.4 KB | Display | PDB format |
PDBx/mmJSON format | 7kgv.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/kg/7kgv ftp://data.pdbj.org/pub/pdb/validation_reports/kg/7kgv | HTTPS FTP |
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-Related structure data
Related structure data | 1f8tS S: Starting model for refinement |
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Similar structure data |
-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments:
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