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Open data
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Basic information
Entry | Database: PDB / ID: 6zng | |||||||||
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Title | MaeB full-length acetyl-CoA bound state | |||||||||
![]() | NADP-dependent malate dehydrogenase,Malate dehydrogenase | |||||||||
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Function / homology | ![]() ![]() ![]() ![]() ![]() Similarity search - Function | |||||||||
Biological species | ![]() ![]() | |||||||||
Method | ![]() ![]() ![]() | |||||||||
![]() | Lovering, A.L. / Harding, C.J. | |||||||||
Funding support | ![]()
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![]() | ![]() Title: A rotary mechanism for allostery in bacterial hybrid malic enzymes. Authors: Harding, C.J. / Cadby, I.T. / Moynihan, P.J. / Lovering, A.L. | |||||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 830 KB | Display | ![]() |
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PDB format | ![]() | 692.6 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 6zn4C ![]() 6zn7C ![]() 6zn9C ![]() 6zneC ![]() 6znjC ![]() 6znkC ![]() 6znrC ![]() 6zntC ![]() 6znuC ![]() 1td9S ![]() 5ceeS C: citing same article ( S: Starting model for refinement |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | Mass: 85954.711 Da / Num. of mol.: 6 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() Strain: ATCC 15356 / DSM 50701 / NCIB 9529 / HD100 / Gene: Bd1834, mdh, Bd1833 / Production host: ![]() ![]() ![]() References: UniProt: Q6MM14, UniProt: Q6MM15, ![]() #2: Chemical | ChemComp-ACO / ![]() Has ligand of interest | N | |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3 Å3/Da / Density % sol: 59.02 % |
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Crystal grow![]() | Temperature: 289 K / Method: vapor diffusion / pH: 8.5 Details: 0.1M Bistris Propane pH 8.5 0.2M sodium citrate tribasic monohydrate 20% PEG 3350 |
-Data collection
Diffraction | Mean temperature: 100 K / Serial crystal experiment: N |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: DECTRIS PILATUS3 S 6M / Detector: PIXEL / Date: Mar 1, 2018 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 2.72→124.801 Å / Num. obs: 160818 / % possible obs: 99.9 % / Redundancy: 6.7 % / CC1/2: 0.99 / Net I/σ(I): 11 |
Reflection shell | Resolution: 2.72→2.86 Å / Num. unique obs: 8003 / CC1/2: 0.32 |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: 5CEE, 1TD9 Resolution: 2.72→109.382 Å / Cross valid method: THROUGHOUT
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Displacement parameters | Biso max: 311.17 Å2 / Biso mean: 108.0413 Å2 / Biso min: 46.39 Å2 | ||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.72→109.382 Å
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