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Yorodumi- PDB-6duv: Crystal structure of the second bromodomain of human BRD4 in comp... -
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-Basic information
Entry | Database: PDB / ID: 6duv | ||||||
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Title | Crystal structure of the second bromodomain of human BRD4 in complex with MS417 inhibitor | ||||||
Components | Bromodomain-containing protein 4BRD4 | ||||||
Keywords | PROTEIN BINDING/Inhibitor / protein-small molecule inhibitor complex / PROTEIN BINDING / PROTEIN BINDING-Inhibitor complex | ||||||
Function / homology | Function and homology information RNA polymerase II C-terminal domain binding / negative regulation of DNA damage checkpoint / P-TEFb complex binding / negative regulation by host of viral transcription / positive regulation of T-helper 17 cell lineage commitment / positive regulation of G2/M transition of mitotic cell cycle / histone reader activity / RNA polymerase II CTD heptapeptide repeat kinase activity / condensed nuclear chromosome / positive regulation of transcription elongation by RNA polymerase II ...RNA polymerase II C-terminal domain binding / negative regulation of DNA damage checkpoint / P-TEFb complex binding / negative regulation by host of viral transcription / positive regulation of T-helper 17 cell lineage commitment / positive regulation of G2/M transition of mitotic cell cycle / histone reader activity / RNA polymerase II CTD heptapeptide repeat kinase activity / condensed nuclear chromosome / positive regulation of transcription elongation by RNA polymerase II / transcription coregulator activity / lysine-acetylated histone binding / p53 binding / chromosome / regulation of inflammatory response / positive regulation of canonical NF-kappaB signal transduction / Potential therapeutics for SARS / transcription coactivator activity / transcription cis-regulatory region binding / chromatin remodeling / DNA damage response / chromatin binding / regulation of transcription by RNA polymerase II / positive regulation of DNA-templated transcription / enzyme binding / positive regulation of transcription by RNA polymerase II / nucleoplasm / nucleus Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | X-RAY DIFFRACTION / SYNCHROTRON / Resolution: 1.8 Å | ||||||
Authors | Babault, N. / Zhou, M.M. | ||||||
Funding support | United States, 1items
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Citation | Journal: To be published Title: Role of Bound Water Molecules in Differential Recognition of Di-Acetylated Histone Peptides by the BRD4 Bromodomains Authors: Babault, N. / Zhang, Q. / Zhang, G. / Zhou, M.M. / Zeng, L. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 6duv.cif.gz | 112.1 KB | Display | PDBx/mmCIF format |
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PDB format | pdb6duv.ent.gz | 85.7 KB | Display | PDB format |
PDBx/mmJSON format | 6duv.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/du/6duv ftp://data.pdbj.org/pub/pdb/validation_reports/du/6duv | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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Unit cell |
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Noncrystallographic symmetry (NCS) | NCS domain:
NCS domain segments: Ens-ID: 1
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