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- PDB-5m1l: Structure of DNA AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCG... -
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Open data
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Basic information
Entry | Database: PDB / ID: 5m1l | |||||||||||||||||||||||||||||||
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Title | Structure of DNA AGCGA-quadruplex adopted by 15-mer d(GCGAGGGAGCGAGGG), VK34, oligonucleotide found in regulatory region of the PLEKHG3 human gene | |||||||||||||||||||||||||||||||
![]() | DNA (5'-D(*![]() ![]() Function / homology | ![]() ![]() Biological species | ![]() ![]() Method | ![]() ![]() Kocman, V. / Plavec, J. | Funding support | | ![]()
![]() ![]() Title: Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions. Authors: Kocman, V. / Plavec, J. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 194.2 KB | Display | ![]() |
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PDB format | ![]() | 159 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
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-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 5m2lC ![]() 5m4wC C: citing same article ( |
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Similar structure data | |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: DNA chain | Mass: 4765.084 Da / Num. of mol.: 2 / Source method: obtained synthetically / Source: (synth.) ![]() ![]() |
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-Experimental details
-Experiment
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NMR experiment |
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Sample preparation
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Sample |
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Sample conditions | Ionic strength: 100 mM / Label: conditions_1 / pH: 6.0 / Pressure: 1 atm / Temperature: 273 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software |
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NMR ensemble | Conformers submitted total number: 10 |