Microtubule-associatedproteins1A/1Blightchain3A / Autophagy-related protein LC3 A / Autophagy-related ubiquitin-like modifier LC3 A / MAP1 light ...Autophagy-related protein LC3 A / Autophagy-related ubiquitin-like modifier LC3 A / MAP1 light chain 3-like protein 1 / MAP1A/MAP1B light chain 3 A / MAP1A/MAP1B LC3 A / Microtubule-associated protein 1 light chain 3 alpha
解像度: 2→32.89 Å / Cor.coef. Fo:Fc: 0.957 / Cor.coef. Fo:Fc free: 0.927 / SU B: 8.881 / SU ML: 0.111 / 交差検証法: THROUGHOUT / ESU R: 0.168 / ESU R Free: 0.162 / 立体化学のターゲット値: MAXIMUM LIKELIHOOD / 詳細: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
Rfactor
反射数
%反射
Selection details
Rfree
0.23693
470
4.8 %
RANDOM
Rwork
0.18147
-
-
-
obs
0.1842
9313
99.89 %
-
溶媒の処理
イオンプローブ半径: 0.8 Å / 減衰半径: 0.8 Å / VDWプローブ半径: 1.2 Å / 溶媒モデル: MASK
原子変位パラメータ
Biso mean: 35.092 Å2
Baniso -1
Baniso -2
Baniso -3
1-
-0.74 Å2
0 Å2
0 Å2
2-
-
-0.74 Å2
0 Å2
3-
-
-
1.48 Å2
精密化ステップ
サイクル: LAST / 解像度: 2→32.89 Å
タンパク質
核酸
リガンド
溶媒
全体
原子数
960
0
9
88
1057
拘束条件
Refine-ID
タイプ
Dev ideal
Dev ideal target
数
X-RAY DIFFRACTION
r_bond_refined_d
0.019
0.019
988
X-RAY DIFFRACTION
r_bond_other_d
0.001
0.02
967
X-RAY DIFFRACTION
r_angle_refined_deg
1.943
1.974
1330
X-RAY DIFFRACTION
r_angle_other_deg
0.918
3
2226
X-RAY DIFFRACTION
r_dihedral_angle_1_deg
6.752
5
114
X-RAY DIFFRACTION
r_dihedral_angle_2_deg
33.456
23.725
51
X-RAY DIFFRACTION
r_dihedral_angle_3_deg
16.329
15
188
X-RAY DIFFRACTION
r_dihedral_angle_4_deg
19.298
15
9
X-RAY DIFFRACTION
r_chiral_restr
0.107
0.2
145
X-RAY DIFFRACTION
r_gen_planes_refined
0.009
0.021
1095
X-RAY DIFFRACTION
r_gen_planes_other
0.001
0.02
232
X-RAY DIFFRACTION
r_nbd_refined
X-RAY DIFFRACTION
r_nbd_other
X-RAY DIFFRACTION
r_nbtor_refined
X-RAY DIFFRACTION
r_nbtor_other
X-RAY DIFFRACTION
r_xyhbond_nbd_refined
X-RAY DIFFRACTION
r_xyhbond_nbd_other
X-RAY DIFFRACTION
r_metal_ion_refined
X-RAY DIFFRACTION
r_metal_ion_other
X-RAY DIFFRACTION
r_symmetry_vdw_refined
X-RAY DIFFRACTION
r_symmetry_vdw_other
X-RAY DIFFRACTION
r_symmetry_hbond_refined
X-RAY DIFFRACTION
r_symmetry_hbond_other
X-RAY DIFFRACTION
r_symmetry_metal_ion_refined
X-RAY DIFFRACTION
r_symmetry_metal_ion_other
X-RAY DIFFRACTION
r_mcbond_it
X-RAY DIFFRACTION
r_mcbond_other
X-RAY DIFFRACTION
r_mcangle_it
X-RAY DIFFRACTION
r_scbond_it
X-RAY DIFFRACTION
r_scangle_it
X-RAY DIFFRACTION
r_rigid_bond_restr
X-RAY DIFFRACTION
r_sphericity_free
X-RAY DIFFRACTION
r_sphericity_bonded
LS精密化 シェル
解像度: 2→2.052 Å / Total num. of bins used: 20
Rfactor
反射数
%反射
Rfree
0.266
34
-
Rwork
0.191
690
-
obs
-
-
100 %
精密化 TLS
手法: refined / Origin x: 12.7371 Å / Origin y: 5.358 Å / Origin z: 8.3726 Å