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Open data
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Basic information
Entry | Database: PDB / ID: 3d0n | ||||||
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Title | Crystal structure of human carbonic anhydrase XIII | ||||||
![]() | Carbonic anhydrase 13![]() | ||||||
![]() | METAL BINDING PROTEIN / ![]() ![]() | ||||||
Function / homology | ![]() Reversible hydration of carbon dioxide / ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() | ||||||
Method | ![]() ![]() ![]() | ||||||
![]() | Di Fiore, A. / De Simone, G. | ||||||
![]() | ![]() Title: Crystal structure of human carbonic anhydrase XIII and its complex with the inhibitor acetazolamide. Authors: Di Fiore, A. / Monti, S.M. / Hilvo, M. / Parkkila, S. / Romano, V. / Scaloni, A. / Pedone, C. / Scozzafava, A. / Supuran, C.T. / De Simone, G. #1: ![]() Title: Refined structure of human carbonic anhydrase II at 2.0 A resolution. Authors: Eriksson, A.E. / Jones, T.A. / Liljas, A. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 136.4 KB | Display | ![]() |
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PDB format | ![]() | 104 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 3czvC ![]() 1ca2S S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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1 | ![]()
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2 | ![]()
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Unit cell |
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Components
#1: Protein | ![]() Mass: 29626.252 Da / Num. of mol.: 2 Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() ![]() ![]() ![]() #2: Chemical | #3: Chemical | ![]() #4: Chemical | ChemComp-GOL / | ![]() #5: Water | ChemComp-HOH / | ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 2.05 Å3/Da / Density % sol: 39.86 % |
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Crystal grow![]() | Temperature: 293 K / Method: vapor diffusion, hanging drop / pH: 4.6 Details: 30% PEG 4000, 0.2 M ammonium acetate, 0.1 M sodium acetate pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
-Data collection
Diffraction | Mean temperature: 100 K |
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Diffraction source | Source: ![]() ![]() ![]() |
Detector | Type: MAR CCD 165 mm / Detector: CCD / Date: Jun 1, 2007 |
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Resolution: 1.55→20 Å / Num. all: 68200 / Num. obs: 68200 / % possible obs: 98.1 % / Redundancy: 3.6 % / Rsym value: 0.058 / Net I/σ(I): 21.3 |
Reflection shell | Resolution: 1.55→1.61 Å / Mean I/σ(I) obs: 3.8 / Num. unique all: 6269 / Rsym value: 0.258 / % possible all: 90.3 |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: PDB ENTRY 1CA2 Resolution: 1.55→20 Å / σ(F): 0 / Stereochemistry target values: Engh & Huber
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Refinement step | Cycle: LAST / Resolution: 1.55→20 Å
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Refine LS restraints |
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