- PDB-2vmi: The structure of seleno-methionine labelled CBM51 from Clostridiu... -
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Open data
ID or keywords:
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Basic information
Entry
Database: PDB / ID: 2vmi
Title
The structure of seleno-methionine labelled CBM51 from Clostridium perfringens GH95
Components
FIBRONECTIN TYPE III DOMAIN PROTEIN
Keywords
SUGAR BINDING PROTEIN / CARBOHYDRATE-BINDING MODULE / SUGAR-BINDING PROTEIN / GALACTOSE / FUCOSIDASE / CLOSTRIDIUM PERFRINGENS
Function / homology
Function and homology information
alpha-L-fucosidase activity / polysaccharide catabolic process / hydrolase activity, hydrolyzing O-glycosyl compounds / metal ion binding Similarity search - Function
SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN ... SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED.
Method to determine structure: SAD Starting model: NONE Resolution: 1.7→66.37 Å / Cor.coef. Fo:Fc: 0.962 / Cor.coef. Fo:Fc free: 0.953 / SU B: 1.433 / SU ML: 0.049 / Cross valid method: THROUGHOUT / ESU R: 0.08 / ESU R Free: 0.08 / Stereochemistry target values: MAXIMUM LIKELIHOOD / Details: HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
Rfactor
Num. reflection
% reflection
Selection details
Rfree
0.178
985
5.1 %
RANDOM
Rwork
0.15
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obs
0.151
18188
99.8 %
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Solvent computation
Ion probe radii: 0.8 Å / Shrinkage radii: 0.8 Å / VDW probe radii: 1.4 Å / Solvent model: MASK