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- PDB-2lxv: Dimeric pil-e g-quadruplex dna from neisseria gonorrhoeae, NMR 11... -
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Open data
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Basic information
Entry | Database: PDB / ID: 2lxv | ||||||||||||||||||||
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Title | Dimeric pil-e g-quadruplex dna from neisseria gonorrhoeae, NMR 11 structures | ||||||||||||||||||||
![]() | 5'-D(*![]() ![]() Function / homology | ![]() ![]() Method | ![]() ![]() Model details | lowest energy, model1 | ![]() Kuryavyi, V. / Patel, D.J. | ![]() ![]() Title: RecA-Binding pilE G4 Sequence Essential for Pilin Antigenic Variation Forms Monomeric and 5' End-Stacked Dimeric Parallel G-Quadruplexes. Authors: Kuryavyi, V. / Cahoon, L.A. / Seifert, H.S. / Patel, D.J. History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 239.8 KB | Display | ![]() |
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PDB format | ![]() | 205 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
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Links
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Assembly
Deposited unit | ![]()
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NMR ensembles |
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Components
#1: DNA chain | Mass: 5122.284 Da / Num. of mol.: 2 / Source method: obtained synthetically |
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-Experimental details
-Experiment
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NMR experiment |
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Sample preparation
Details |
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Sample |
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Sample conditions | Ionic strength: 0.105 / pH: 6.8 / Pressure: ambient / Temperature: 298 K |
-NMR measurement
NMR spectrometer |
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Processing
NMR software | Name: ![]() Developer: BRUNGER, SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE Classification: refinement |
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Refinement | Method: torsion angle dynamics, ![]() Software ordinal: 1 |
NMR representative | Selection criteria: lowest energy |
NMR ensemble | Conformer selection criteria: structures with the least restraint violations Conformers calculated total number: 100 / Conformers submitted total number: 11 |