+Open data
-Basic information
Entry | Database: PDB / ID: 1vig | ||||||
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Title | NMR STUDY OF VIGILIN, REPEAT 6, 40 STRUCTURES | ||||||
Components | VIGILIN | ||||||
Keywords | RIBONUCLEOPROTEIN / RNA-BINDING PROTEIN | ||||||
Function / homology | Function and homology information HDL clearance / : / high-density lipoprotein particle / lipid transport / cholesterol metabolic process / cadherin binding / mRNA binding / lipid binding / RNA binding / nucleus ...HDL clearance / : / high-density lipoprotein particle / lipid transport / cholesterol metabolic process / cadherin binding / mRNA binding / lipid binding / RNA binding / nucleus / plasma membrane / cytoplasm Similarity search - Function | ||||||
Biological species | Homo sapiens (human) | ||||||
Method | SOLUTION NMR | ||||||
Authors | Musco, G. / Stier, G. / Joseph, C. / Morelli, M.A.C. / Nilges, M. / Gibson, T.J. / Pastore, A. | ||||||
Citation | Journal: Cell(Cambridge,Mass.) / Year: 1996 Title: Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. Authors: Musco, G. / Stier, G. / Joseph, C. / Castiglione Morelli, M.A. / Nilges, M. / Gibson, T.J. / Pastore, A. #1: Journal: FEBS Lett. / Year: 1995 Title: The Kh Module Has an Alfa(Slash)Beta Fold Authors: Morelli, M.A.C. / Stier, G. / Gibson, T.J. / Joseph, C. / Musco, G. / Pastore, A. / Trave, G. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1vig.cif.gz | 993.4 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1vig.ent.gz | 873.5 KB | Display | PDB format |
PDBx/mmJSON format | 1vig.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/vi/1vig ftp://data.pdbj.org/pub/pdb/validation_reports/vi/1vig | HTTPS FTP |
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-Related structure data
-Links
-Assembly
Deposited unit |
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1 |
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NMR ensembles |
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-Components
#1: Protein | Mass: 8208.354 Da / Num. of mol.: 1 / Fragment: KH6, RESIDUES 432 TO 501 Source method: isolated from a genetically manipulated source Source: (gene. exp.) Homo sapiens (human) / Description: N-TERMINAL 6-HISTIDINE FUSION PROTEIN YES / Cell line: BL21 / Gene: HUMAN VIGILIN SIXTH KH REPEAT / Plasmid: PET9D / Species (production host): Escherichia coli / Gene (production host): HUMAN VIGILIN SIXTH KH REPEAT / Production host: Escherichia coli BL21(DE3) (bacteria) / Strain (production host): BL21 (DE3) / References: UniProt: Q00341 |
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-Experimental details
-Experiment
Experiment | Method: SOLUTION NMR |
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-Sample preparation
Crystal grow | *PLUS Method: other |
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-Processing
Software |
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NMR software | Name: X-PLOR / Developer: BRUNGER / Classification: refinement | ||||||||
NMR ensemble | Conformers submitted total number: 40 |