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- PDB-1kn5: SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CERE... -
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Basic information
Entry | Database: PDB / ID: 1kn5 | ||||||
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Title | SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE | ||||||
![]() | Transcription regulatory protein ADR6 | ||||||
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Function / homology | ![]() carbon catabolite activation of transcription from RNA polymerase II promoter / positive regulation of mating type switching / HDACs deacetylate histones / ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() | ||||||
Model type details | minimized average | ||||||
![]() | Tu, X. / Wu, J. / Xu, Y. / Shi, Y. | ||||||
![]() | ![]() Title: 1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain. Authors: Tu, X. / Wu, J. / Xu, Y. / Shi, Y. #1: ![]() Title: 1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain Authors: Tu, X. / Wu, J. / Xu, Y. / Shi, Y. #2: ![]() Title: Expression and purification of a recombinant DNA-binding domain of ADR6 protein from Escherichia coli and its secondary structure characterization Authors: Tu, X. / Xiao, Y. / Zeng, W. / Shi, Y. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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PDBx/mmCIF format | ![]() | 49.7 KB | Display | ![]() |
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PDB format | ![]() | 36.2 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 1kkxC C: citing same article ( |
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Similar structure data | |
Other databases |
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Links
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Assembly
Deposited unit | ![]()
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1 |
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NMR ensembles |
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Components
#1: Protein | Mass: 14566.800 Da / Num. of mol.: 1 / Fragment: ARID domain Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() Gene: adr6 / Plasmid: pREP-4 / Species (production host): Escherichia coli / Production host: ![]() ![]() ![]() |
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-Experimental details
-Experiment
Experiment | Method: ![]() | ||||||||||||||||
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NMR experiment |
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Sample preparation
Details | Contents: 1MM ADR6 ARID DOMAIN U-15N, U-13C, 50MM PHOSPHATE BUFFER PH4.9, 90% H2O, 10%D2O Solvent system: 90% H2O/10% D2O |
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Sample conditions | Ionic strength: 50mM PHOSPHATE BUFFER / pH: 4.9 / Pressure: ambient / Temperature: 300 K |
Crystal grow![]() | *PLUS Method: other / Details: NMR |
-NMR measurement
Radiation | Protocol: SINGLE WAVELENGTH / Monochromatic (M) / Laue (L): M |
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Radiation wavelength | Relative weight: 1 |
NMR spectrometer | Type: Bruker DMX / Manufacturer: Bruker / Model![]() |
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Processing
NMR software | Name: CNS / Version: v 1.0 / Developer: A.T. BRUNGER / Classification: refinement |
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Refinement | Method: torsion angle dynamics / Software ordinal: 1 |
NMR representative | Selection criteria: minimized average structure |
NMR ensemble | Conformers submitted total number: 1 |