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- PDB-1cck: ALTERING SUBSTRATE SPECIFICITY OF CYTOCHROME C PEROXIDASE TOWARDS... -
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Open data
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Basic information
Entry | Database: PDB / ID: 1cck | ||||||
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Title | ALTERING SUBSTRATE SPECIFICITY OF CYTOCHROME C PEROXIDASE TOWARDS A SMALL MOLECULAR SUBSTRATE PEROXIDASE BY SUBSTITUTING TYROSINE FOR PHE 202 | ||||||
![]() | CYTOCHROME C PEROXIDASE![]() | ||||||
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Function / homology | ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() ![]() Similarity search - Function | ||||||
Biological species | ![]() ![]() ![]() | ||||||
Method | ![]() ![]() | ||||||
![]() | Cao, Y. / Musah, R.A. / Wilcox, S.K. / Goodin, D.B. / Mcree, D.E. | ||||||
![]() | ![]() Title: Crystal structure of recombinant pea cytosolic ascorbate peroxidase. Authors: Patterson, W.R. / Poulos, T.L. #1: ![]() Title: Altering Substrate Specificity at the Heme Edge of Cytochrome C Peroxidase Authors: Wilcox, S.K. / Jensen, G.M. / Fitzgerald, M.M. / Mcree, D.E. / Goodin, D.B. #2: ![]() Title: The Asp-His-Fe Triad of Cytochrome C Peroxidase Controls the Reduction Potential, Electronic Structure, and Coupling of the Tryptophan Free Radical to the Heme Authors: Goodin, D.B. / Mcree, D.E. | ||||||
History |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
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Download
PDBx/mmCIF format | ![]() | 86.7 KB | Display | ![]() |
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PDB format | ![]() | 65.1 KB | Display | ![]() |
PDBx/mmJSON format | ![]() | Tree view | ![]() | |
Others | ![]() |
-Validation report
Arichive directory | ![]() ![]() | HTTPS FTP |
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-Related structure data
Related structure data | ![]() 1apxC ![]() 1ccaS S: Starting model for refinement C: citing same article ( |
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Similar structure data |
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Links
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Assembly
Deposited unit | ![]()
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Unit cell |
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Components
#1: Protein | ![]() Mass: 33241.938 Da / Num. of mol.: 1 / Mutation: F202Y Source method: isolated from a genetically manipulated source Source: (gene. exp.) ![]() ![]() ![]() Cell line: BL21 / Gene: CCP / Organelle: MITOCHONDRIA ![]() ![]() ![]() ![]() ![]() |
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#2: Chemical | ChemComp-HEM / ![]() |
#3: Water | ChemComp-HOH / ![]() |
-Experimental details
-Experiment
Experiment | Method: ![]() |
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Sample preparation
Crystal | Density Matthews: 3.1 Å3/Da / Density % sol: 61 % |
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Crystal grow![]() | Method: dialaysis / Details: DIALYSIS AGAINST DISTILLED WATER, dialaysis |
Crystal grow | *PLUS Method: unknown |
-Data collection
Diffraction | Mean temperature: 290 K |
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Diffraction source | Source: ![]() |
Detector | Type: SIEMENS / Detector: AREA DETECTOR / Date: Jun 1, 1995 / Details: NO |
Radiation | Monochromator: NO / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength![]() |
Reflection | Highest resolution: 2.1 Å / Num. obs: 23157 / % possible obs: 91.3 % / Observed criterion σ(I): 1.1 / Redundancy: 2.2 % / Biso Wilson estimate: 41.4 Å2 / Rmerge(I) obs: 0.07 / Rsym value: 0.094 / Net I/σ(I): 7.1 |
Reflection shell | Resolution: 2.01→2.09 Å / Redundancy: 1.7 % / Mean I/σ(I) obs: 1 / Rsym value: 0.29 / % possible all: 77.5 |
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Processing
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Refinement | Method to determine structure![]() ![]() Starting model: 1CCA Resolution: 2.1→5 Å / Data cutoff high absF: 100000 / Data cutoff low absF: 1 /
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Refinement step | Cycle: LAST / Resolution: 2.1→5 Å
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Xplor file |
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Refinement | *PLUS Rfactor obs: 0.184 / Rfactor Rwork![]() | |||||||||||||||||||||
Solvent computation | *PLUS | |||||||||||||||||||||
Displacement parameters | *PLUS |