+Open data
-Basic information
Entry | Database: PDB / ID: 1all | ||||||
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Title | ALLOPHYCOCYANIN | ||||||
Components | (ALLOPHYCOCYANIN) x 2 | ||||||
Keywords | LIGHT-HARVESTING PROTEIN / PHYCOBILIPROTEIN | ||||||
Function / homology | Function and homology information | ||||||
Biological species | Arthrospira platensis (bacteria) | ||||||
Method | X-RAY DIFFRACTION / MIR / Resolution: 2.3 Å | ||||||
Authors | Brejc, K. / Ficner, R. / Huber, R. / Steinbacher, S. | ||||||
Citation | Journal: J.Mol.Biol. / Year: 1995 Title: Isolation, crystallization, crystal structure analysis and refinement of allophycocyanin from the cyanobacterium Spirulina platensis at 2.3 A resolution. Authors: Brejc, K. / Ficner, R. / Huber, R. / Steinbacher, S. | ||||||
History |
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-Structure visualization
Structure viewer | Molecule: MolmilJmol/JSmol |
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-Downloads & links
-Download
PDBx/mmCIF format | 1all.cif.gz | 71.6 KB | Display | PDBx/mmCIF format |
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PDB format | pdb1all.ent.gz | 57.6 KB | Display | PDB format |
PDBx/mmJSON format | 1all.json.gz | Tree view | PDBx/mmJSON format | |
Others | Other downloads |
-Validation report
Arichive directory | https://data.pdbj.org/pub/pdb/validation_reports/al/1all ftp://data.pdbj.org/pub/pdb/validation_reports/al/1all | HTTPS FTP |
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-Related structure data
Similar structure data |
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-Links
-Assembly
Deposited unit |
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1 |
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2 |
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Unit cell |
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-Components
#1: Protein | Mass: 17107.455 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Details: CHROMOPHORE PHYCOCYANOBILIN / Source: (natural) Arthrospira platensis (bacteria) / References: UniProt: P72504 | ||
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#2: Protein | Mass: 17273.684 Da / Num. of mol.: 1 / Source method: isolated from a natural source / Details: CHROMOPHORE PHYCOCYANOBILIN / Source: (natural) Arthrospira platensis (bacteria) / References: UniProt: P72505 | ||
#3: Chemical | #4: Water | ChemComp-HOH / | |
-Experimental details
-Experiment
Experiment | Method: X-RAY DIFFRACTION / Number of used crystals: 1 |
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-Sample preparation
Crystal | Density Matthews: 2.85 Å3/Da / Density % sol: 54 % | ||||||||||||||||||||||||||||||||||||
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Crystal | *PLUS | ||||||||||||||||||||||||||||||||||||
Crystal grow | *PLUS pH: 7 / Method: vapor diffusion, sitting drop | ||||||||||||||||||||||||||||||||||||
Components of the solutions | *PLUS
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-Data collection
Diffraction | Mean temperature: 268 K |
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Diffraction source | Source: ROTATING ANODE / Type: RIGAKU RUH2R / Wavelength: 1.5418 |
Detector | Type: MARRESEARCH / Detector: IMAGE PLATE |
Radiation | Monochromator: GRAPHITE(002) / Monochromatic (M) / Laue (L): M / Scattering type: x-ray |
Radiation wavelength | Wavelength: 1.5418 Å / Relative weight: 1 |
Reflection | Resolution: 2.3→999 Å / Num. obs: 17566 / % possible obs: 95.3 % / Redundancy: 9.5 % / Rmerge(I) obs: 0.07 / Rsym value: 0.022 |
Reflection shell | Resolution: 2.3→2.34 Å / % possible all: 68.6 |
Reflection | *PLUS Num. measured all: 177454 / Rmerge(I) obs: 0.07 |
Reflection shell | *PLUS % possible obs: 68.6 % |
-Processing
Software |
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Refinement | Method to determine structure: MIR / Resolution: 2.3→8 Å / σ(F): 0
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Displacement parameters | Biso mean: 23 Å2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refine analyze | Luzzati coordinate error obs: 0.25 Å | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Refinement step | Cycle: LAST / Resolution: 2.3→8 Å
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Refine LS restraints |
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