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- SASDBW9: Immunoglobulin domains 4,5 of Nucleoporin Pom152 (Pom152 Ig-4,5: ... -
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Open data
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Basic information
Entry | Database: SASBDB / ID: SASDBW9 |
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![]() | Immunoglobulin domains 4,5 of Nucleoporin Pom152 (Pom152 Ig-4,5: amino acids 718-920)
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Function / homology | ![]() nuclear pore transmembrane ring / spindle pole body duplication / nuclear pore organization / structural constituent of nuclear pore / nucleocytoplasmic transport / nuclear envelope lumen / mRNA transport / ![]() ![]() ![]() ![]() ![]() Similarity search - Function |
Biological species | ![]() ![]() ![]() |
![]() | ![]() Title: Molecular Architecture of the Major Membrane Ring Component of the Nuclear Pore Complex Authors: Upla P / Kim S / Sampathkumar P / Dutta K / Cahill S / Chemmama I / Williams R / Bonanno J / Rice W / Stokes D / Cowburn D / Almo S / Sali A / Rout M |
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Structure visualization
Structure viewer | Molecule: ![]() ![]() |
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Downloads & links
-Models
Model #1109 | ![]() Type: dummy / Software: DAMMIN / Radius of dummy atoms: 2.00 A / Chi-square value: 1.966 ![]() |
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Sample
![]() | Name: Immunoglobulin domains 4,5 of Nucleoporin Pom152 (Pom152 Ig-4,5: amino acids 718-920) Specimen concentration: 0.50-10.10 |
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Buffer | Name: 10mM HEPES, 150mM NaCl, 10%(v/v) glycerol, 5mM DTT / pH: 7.5 |
Entity #576 | Type: protein / Description: Nucleoporin POM152 / Formula weight: 23.805 / Num. of mol.: 1 Source: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) References: UniProt: P39685 Sequence: RVKPSASLKL HHDLKLCLGD HSSVPVALKG QGPFTLTYDI IETFSSKRKT FEIKEIKTNE YVIKTPVFTT GGDYILSLVS IKDSTGCVVG LSQPDAKIQV RRDIPSAAFN FFEPIKEAKI KHGSVTEIPL KLSGEGPFTV KFKHMDYDGN IVKEFENKFQ NSYKPALKVS ...Sequence: RVKPSASLKL HHDLKLCLGD HSSVPVALKG QGPFTLTYDI IETFSSKRKT FEIKEIKTNE YVIKTPVFTT GGDYILSLVS IKDSTGCVVG LSQPDAKIQV RRDIPSAAFN FFEPIKEAKI KHGSVTEIPL KLSGEGPFTV KFKHMDYDGN IVKEFENKFQ NSYKPALKVS KEGLYQLVDI RDSSCQGNVI YRNSLYKVSF LEKEGHHHHH H |
-Experimental information
Beam | Instrument name: Stanford Synchrotron Radiation Lightsource (SSRL) BL4-2 City: Stanford, CA / 国: USA ![]() ![]() | ||||||||||||||||||||||||||||||||||||
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Detector | Name: Rayonix MX225-HE | ||||||||||||||||||||||||||||||||||||
Scan | Measurement date: Apr 12, 2015 / Storage temperature: 15 °C / Cell temperature: 15 °C / Exposure time: 1 sec. / Number of frames: 20 / Unit: 1/A /
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Distance distribution function P(R) |
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Result | Comments: Guinier Rg and I(0) were calculated using AutoRg. The experimental MW was estimated using SAXSMOW.
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