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TitleDeterminants of ligand binding and catalytic activity in the myelin enzyme 2',3'-cyclic nucleotide 3'-phosphodiesterase.
Journal, issue, pagesSci Rep, Vol. 5, Page 16520-16520, Year 2015
Publish dateSep 3, 2014 (structure data deposition date)
AuthorsRaasakka, A. / Myllykoski, M. / Laulumaa, S. / Lehtimaki, M. / Hartlein, M. / Moulin, M. / Kursula, I. / Kursula, P.
External linksSci Rep / PubMed:26563764
MethodsX-ray diffraction
Resolution1.04 - 2.7 Å
Structure data

PDB-4wbi:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutations H230Q and H309Q
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-4wbl:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation F235A
Method: X-RAY DIFFRACTION / Resolution: 2.501 Å

PDB-4wc9:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation F235L
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-4wca:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H230Q, complexed with citrate
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-4wcb:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation H309Q
Method: X-RAY DIFFRACTION / Resolution: 1.57 Å

PDB-4wcc:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation P225G
Method: X-RAY DIFFRACTION / Resolution: 2.7 Å

PDB-4wda:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation P296G, complexed with 2'-AMP
Method: X-RAY DIFFRACTION / Resolution: 1.85 Å

PDB-4wdb:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation R307Q, complexed with 2'-AMP
Method: X-RAY DIFFRACTION / Resolution: 1.6 Å

PDB-4wdd:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation T232A, complexed with citrate
Method: X-RAY DIFFRACTION / Resolution: 2.101 Å

PDB-4wde:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation T311A
Method: X-RAY DIFFRACTION / Resolution: 2.4 Å

PDB-4wdf:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation V321A, complexed with 2',5'-ADP
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-4wdg:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation V321A, complexed with 2',5'-ADP
Method: X-RAY DIFFRACTION / Resolution: 2.05 Å

PDB-4wdh:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation Y168A
Method: X-RAY DIFFRACTION / Resolution: 1.9 Å

PDB-4wex:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation Y168S
Method: X-RAY DIFFRACTION / Resolution: 2.1 Å

PDB-4wfr:
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation T232A, complexed with 2'-AMP
Method: X-RAY DIFFRACTION / Resolution: 2.0 Å

PDB-5ae0:
Perdeuterated mouse CNPase catalytic domain at atomic resolution
Method: X-RAY DIFFRACTION / Resolution: 1.04 Å

Chemicals

ChemComp-HOH:
WATER / Water

ChemComp-CL:
Unknown entry / Chloride

ChemComp-GOL:
GLYCEROL / Glycerol

ChemComp-CIT:
CITRIC ACID / Citric acid

ChemComp-1PE:
PENTAETHYLENE GLYCOL / precipitant*YM / Polyethylene glycol

ChemComp-2AM:
ADENOSINE-2'-MONOPHOSPHATE / Adenosine monophosphate

ChemComp-A2P:
ADENOSINE-2'-5'-DIPHOSPHATE / Adenosine diphosphate

ChemComp-ACY:
ACETIC ACID / Acetic acid

Source
  • mus musculus (house mouse)
KeywordsHYDROLASE / myelin / nervous system

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