[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,269 items for (author: zhu & b)

EMDB-18664:
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-18665:
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-18666:
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv0:
Structure of the native microtubule lattice nucleated from the yeast spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv2:
Structure of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

PDB-8qv3:
Structure of the y-Tubulin Small Complex (yTuSC) as part of the native y-Tubulin Ring Complex (yTuRC) capping microtubule minus ends at the spindle pole body
Method: subtomogram averaging / : Dendooven T, Yatskevich S, Burt A, Bellini D, Kilmartin J, Barford D

EMDB-34880:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34891:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-34892:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hlp:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 (apo)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hma:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with tetrandrine (TET)
Method: single particle / : Wei Y, Yu Z, Zhao Y

PDB-8hmb:
Cryo-EM structure of human high-voltage activated L-type calcium channel CaV1.2 in complex with benidipine (BEN)
Method: single particle / : Wei Y, Yu Z, Zhao Y

EMDB-37362:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-37363:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9a:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-7909 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

PDB-8w9b:
CryoEM structure of human PI3K-alpha (P85/P110-H1047R) with QR-8557 binding at an allosteric site
Method: single particle / : Huang X, Ren X, Zhong W

EMDB-35163:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35164:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-36339:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37446:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37447:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i47:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 5.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i48:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in closed state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8jj3:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 2.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8wcq:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in intermediate state
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8wcr:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 4 in open state
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37240:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-37241:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khc:
SARS-CoV-2 Omicron spike in complex with 5817 Fab
Method: single particle / : Cao L, Wang X

PDB-8khd:
The interface structure of Omicron RBD binding to 5817 Fab
Method: single particle / : Cao L, Wang X

EMDB-35161:
Cryo-EM structure of nanodisc (asolectin) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-35162:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i41:
Cryo-EM structure of nanodisc (asolectin) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

PDB-8i42:
Cryo-EM structure of nanodisc (PE:PS:PC) reconstituted GLIC at pH 7.5
Method: single particle / : Bharambe N, Li Z, Basak S

EMDB-37104:
96-nm axonemal repeat with RS1/2/3
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37111:
48-nm repeat DMT
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37114:
Radial Spoke 1 (RS1)
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37116:
RS1 refined with head mask
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37117:
Radial Spoke 2 (RS2)
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37118:
Radial Spoke 2 (RS2) head
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37119:
Radial Spoke 3
Method: subtomogram averaging / : Cong X, Yao C

EMDB-37120:
Radial Spoke 3 head
Method: subtomogram averaging / : Cong X, Yao C

EMDB-41363:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

EMDB-36651:
hOCT1 in complex with metformin in outward open conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

EMDB-36652:
hOCT1 in complex with metformin in outward occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

EMDB-36653:
hOCT1 in complex with metformin in inward occluded conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

EMDB-36654:
hOCT1 in complex with nb5660 in inward facing partially open 1 conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

EMDB-36655:
hOCT1 in complex with nb5660 in inward facing fully open conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

EMDB-36656:
hOCT1 in complex with nb5660 in inward facing partially open 2 conformation
Method: single particle / : Zhang S, Zhu A, Kong F, Chen J, Lan B, He G, Gao K, Cheng L, Yan C, Chen L, Liu X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more