[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 469 items for (author: s. & wu)

PDB-8kdb:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in dimeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

PDB-8kdc:
Cryo-EM structure of the human parainfluenza virus hPIV3 L-P polymerase in monomeric form
Method: single particle / : Xie J, Wang L, Zhai G, Wu D, Lin Z, Wang M, Yan X, Gao L, Huang X, Fearns R, Chen S

PDB-8qct:
Cryo-EM structure of the inward-facing choline-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8j1p:
Cryo-EM structure of Ufd4 in complex with K29/48 triUb
Method: single particle / : Ai HS, Mao JX, Wu XW, Pan M, Liu L

PDB-8qcx:
Cryo-EM structure of the inward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qd0:
Cryo-EM structure of the inward-facing choline-bound FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcs:
Cryo-EM structure of the inward-facing FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8r8t:
Cryo-EM structure of the inward-facing ethanolamine-bound FLVCR1
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8qcy:
Cryo-EM structure of the outward-facing FLVCR2
Method: single particle / : Weng TH, Wu D, Safarian S

PDB-8j1r:
cryo-EM structures of Ufd4 in complex with Ubc4-Ub
Method: single particle / : Ai HS, Mao JX, Wu XW, Cai HY, Pan M, Liu L

PDB-8tl6:
Cryo-EM structure of DDB1deltaB-DDA1-DCAF5
Method: single particle / : Yue H, Hunkeler M, Roy Burman SS, Fischer ES

PDB-8woq:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wor:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at neutral pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wos:
Cryo-EM structure of human SIDT1 protein with C1 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-8wot:
Cryo-EM structure of human SIDT1 protein with C2 symmetry at low pH
Method: single particle / : Liu W, Tang M, Wang J, Zhang X, Wu S, Ru H

PDB-7xog:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Postfusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-8tqm:
Cryo-EM structure of E3 ubiquitin ligase Doa10 from Saccharomyces cerevisiae
Method: single particle / : Park E, Itskanov SI

PDB-8x79:
MRE-269 bound Prostacyclin Receptor G protein complex
Method: single particle / : Wang JJ, Jin S, Zhang H, Xu Y, Hu W, Jiang Y, Chen C, Wang DW, Xu HE, Wu C

PDB-8x7a:
Treprostinil bound Prostacyclin Receptor G protein complex
Method: single particle / : Wang JJ, Jin S, Zhang H, Xu Y, Hu W, Jiang Y, Chen C, Wang DW, Xu HE, Wu C

PDB-7xoe:
Cryo-EM structure of S glycoprotein encoded by the Covid-19 mRNA vaccine candidate RQ3013 (Prefusion state)
Method: single particle / : Wu Z, Yu Z, Tan S, Lu J, Lu G, Lin J

PDB-8j8j:
Membrane bound PRTase, C3 symmetry, donor bound
Method: single particle / : Wu FY, Gao S, Zhang L, Rao ZH

PDB-8j8k:
Membrane bound PRTase, C3 symmetry, acceptor bound
Method: single particle / : Wu FY, Gao S, Zhang L, Rao ZH

PDB-8kfx:
Gi bound CCR8 complex with nonpeptide agonist LMD-009
Method: single particle / : Jiang S, Lin X, Wu LJ, Xu F

PDB-8kfy:
Gi bound CCR8 complex with nonpeptide agonist ZK 756326
Method: single particle / : Jiang S, Lin X, Wu LJ, Xu F

PDB-8kfz:
Gi bound CCR8 in ligand free state
Method: single particle / : Jiang S, Lin X, Wu LJ, Xu F

PDB-7yoy:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAbs 3E8 and 5E3 (localized refinement)
Method: single particle / : Liu L, Sun H, Jiang Y, Hong J, Zheng Q, Li S, Chen Y, Xia N

PDB-7yp1:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 10E4 (localized refinement)
Method: single particle / : Liu L, Sun H, Jiang Y, Hong J, Zheng Q, Li S, Chen Y, Xia N

PDB-7yp2:
Cryo-EM structure of EBV gHgL-gp42 in complex with mAb 6H2 (localized refinement)
Method: single particle / : Liu L, Sun H, Jiang Y, Hong J, Zheng Q, Li S, Chen Y, Xia N

PDB-8tm1:
Antibody N3-1 bound to RBDs in the up and down conformations
Method: single particle / : Hsieh CL, McLellan JS

PDB-8tma:
Antibody N3-1 bound to RBD in the up conformation
Method: single particle / : Hsieh CL, McLellan JS

PDB-8fhs:
Human L-type voltage-gated calcium channel Cav1.2 in the presence of amiodarone and sofosbuvir at 3.3 Angstrom resolution
Method: single particle / : Gao S, Yao X, Yan N

PDB-8we6:
Human L-type voltage-gated calcium channel Cav1.2 at 2.9 Angstrom resolution
Method: single particle / : Gao S, Yao X, Yan N

PDB-8we7:
Human L-type voltage-gated calcium channel Cav1.2 in the presence of calciseptine at 3.2 Angstrom resolution
Method: single particle / : Gao S, Yao X, Yan N

PDB-8we8:
Human L-type voltage-gated calcium channel Cav1.2 in the presence of calciseptine, amlodipine and pinaverium at 2.9 Angstrom resolution
Method: single particle / : Gao S, Yao X, Yan N

PDB-8we9:
Human L-type voltage-gated calcium channel Cav1.2 (Class I) in the presence of pinaverium at 3.0 Angstrom resolution
Method: single particle / : Gao S, Yao X, Fan X, Yan N

PDB-8wea:
Human L-type voltage-gated calcium channel Cav1.2 (Class II) in the presence of pinaverium at 3.2 Angstrom resolution
Method: single particle / : Gao S, Yao X, Fan X, Yan N

PDB-8k0b:
Cryo-EM structure of TMEM63C
Method: single particle / : Qin Y, Yu D, Dong J, Dang S

PDB-8hf3:
Cryo-EM structure of human ZDHHC9/GCP16 complex
Method: single particle / : Wu J, Hu Q, Zhang Y, Liu S, Yang A

PDB-8hfc:
Cryo-EM structure of yeast Erf2/Erf4 complex
Method: single particle / : Wu J, Hu Q, Zhang Y, Yang A, Liu S

PDB-8jlj:
T1AM-bound mTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jlk:
Ulotaront(SEP-363856)-bound mTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jln:
T1AM-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jlo:
Ulotaront(SEP-363856)-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jlp:
Ralmitaront(RO-6889450)-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jlq:
Fenoldopam-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jlr:
A77636-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jso:
AMPH-bound hTAAR1-Gs protein complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8jsp:
Ulotaront(SEP-363856)-bound Serotonin 1A (5-HT1A) receptor-Gi complex
Method: single particle / : Xu Z, Guo LL, Zhao C, Shen SY, Sun JP, Shao ZH

PDB-8j6z:
Cryo-EM structure of the Arabidopsis thaliana photosystem I(PSI-LHCII-ST2)
Method: single particle / : Chen SJB, Wu JH, Sui SF, Zhang LX

PDB-8j7a:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana PSI in state 1 (PSI-ST1)
Method: single particle / : Chen SJB, Wu JH, Sui SF, Zhang LX

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more